Package: avotrex 1.3.1

avotrex: A Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder

Grafts the extinct bird species from the 'Avotrex' database (Sayol et al., in review) on to the 'BirdTree' phylogenies <https://birdtree.org>, using a set of different commands.

Authors:Joseph Wayman [aut, cre], Thomas J. Matthews [aut], Paul Dufour [ctb], Ferran Sayol [ctb], Pedro Cardoso [ctb]

avotrex_1.3.1.tar.gz
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avotrex_1.3.1.tgz(r-4.4-any)avotrex_1.3.1.tgz(r-4.3-any)
avotrex_1.3.1.tar.gz(r-4.5-noble)avotrex_1.3.1.tar.gz(r-4.4-noble)
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avotrex.pdf |avotrex.html✨
avotrex/json (API)
NEWS

# Install 'avotrex' in R:
install.packages('avotrex', repos = c('https://joe-wayman.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/joe-wayman/avotrex/issues

Datasets:

On CRAN:

2 exports 2.07 score 66 dependencies 8 scripts 391 downloads

Last updated 1 months agofrom:8db658f13d. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 29 2024
R-4.5-winOKAug 29 2024
R-4.5-linuxOKAug 29 2024
R-4.4-winOKAug 29 2024
R-4.4-macOKAug 29 2024
R-4.3-winOKAug 29 2024
R-4.3-macOKAug 29 2024

Exports:AvoBindAvoPhylo

Dependencies:apebitbit64bitopscliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdigestdoParalleldoSNOWdplyrexpmfansifastmatchforeachfsgenericsglueigraphiteratorslatticelazyevallifecyclemagrittrmapsMASSMatrixmnormtnlmenumDerivoptimParallelphangornphytoolspillarpkgconfigPlotToolspurrrquadprogR.cacheR.methodsS3R.ooR.utilsR6rbibutilsRcppRCurlRdpackrlangscatterplot3dsnowstringistringrtibbletidyrtidyselecttidytreeTreeToolsutf8vctrswithryulab.utils

avotrex R Package

Joseph P. Wayman and Thomas J. Matthews

Rendered fromavotrex-r-package.Rmdusingknitr::rmarkdownon Aug 29 2024.

Last update: 2024-07-10
Started: 2024-03-28